# Our code for predicting cell type of neurons from Allen Cell DB

**URL:** https://community.brain-map.org/t/our-code-for-predicting-cell-type-of-neurons-from-allen-cell-db/248
**Category:** Show & Tell
**Tags:** rave, atlas-cell-types, allensdk, analysis, publication
**Created:** [August 23, 2019, 3:49am UTC](https://community.brain-map.org/t/our-code-for-predicting-cell-type-of-neurons-from-allen-cell-db/248 "2019-08-23T03:49:46Z")
**Posts on this page:** 1
**Page:** 1

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### Author: ![spookey](https://yyz1.discourse-cdn.com/flex027/user_avatar/community.brain-map.org/spookey/32/74_2.png) [@spookey](https://community.brain-map.org/u/spookey)
#### Post date: [August 23, 2019, 3:49am UTC](https://community.brain-map.org/t/our-code-for-predicting-cell-type-of-neurons-from-allen-cell-db/248/1 "2019-08-23T03:49:46Z")

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Hi. It’s first post!

I just wanted to share our work at [GitHub](https://github.com/HyunsuLee/clustering_allen_neuron).

We used three kinds of machine learning methods(LASSO, random forest, ANN) for predicting transgenic cell marker.

Electrophysiological features from Allen Cell Type Database were elected for input data.

We compared the performance of machine learning models.

This work has been published in [Brain Research Bulletin Aug 2019](https://www.sciencedirect.com/science/article/abs/pii/S0361923018309961).

Thank 😀