how-to

Topic Replies Views Activity
Downloading gene expression of region
Technical
analysis ,  api ,  how-to ,  in-situ-hybridization
3 194 March 25, 2021
Question regarding Section position within specimen in Human Brain
Technical
atlas-human-brain-adult ,  anatomy ,  how-to ,  human
2 142 March 16, 2021
CCFv3 Highlights: Transgene Expression Data
Show & Tell
atlas-reference-maps ,  reference-coordinates ,  anatomy ,  how-to
0 195 March 9, 2021
Doubts about mouse RNA-Seq single cell data
Science
experiment-design ,  analysis ,  how-to ,  rna-seq ,  mouse ,  transcriptomics_explorer
4 297 March 8, 2021
Fastq and Bam file mapping to sample IDs in Berg Patchseq transcriptomic dataset
Technical
transcriptomics ,  analysis ,  how-to ,  rna-seq
1 161 March 5, 2021
[Brainspan ISH] Atlas Image to Section Image
Technical
reference-coordinates ,  anatomy ,  allensdk ,  api ,  how-to ,  human
1 175 February 26, 2021
Download the outlines of brain areas
Technical
atlas-reference-maps ,  anatomy ,  analysis ,  how-to ,  annotation
1 137 February 26, 2021
How to determine the flow Direction of Mouse Connectivity Data
Technical
atlas-mouse-brain-connectivity ,  experiment-design ,  analysis ,  how-to
2 149 February 26, 2021
Differential search (Human Brain)
Technical
atlas-human-brain-adult ,  analysis ,  how-to
2 134 February 25, 2021
Reproducing r-score correlations in Allen Human Brain Atlas
Science
atlas-human-brain-adult ,  training ,  transcriptomics ,  analysis ,  how-to
9 294 February 22, 2021
Allen Mouse CCF - accessing and using related data and tools
Technical
atlas-reference-maps ,  reference-coordinates ,  how-to
0 4317 November 21, 2019
Finding Region Areas of ABA Plates
Technical
atlas-reference-maps ,  anatomy ,  analysis ,  how-to
2 206 February 11, 2021
Neuropixel - empty field in units
Technical
brain-observatory-visual-coding ,  electrophysiology ,  allensdk ,  api ,  how-to
2 142 February 8, 2021
Alternative Synapse Models in BMTK
Technical
api ,  how-to ,  software
1 155 February 1, 2021
Open for (neuro)science tutorials: Tools for modeling
Show & Tell
training ,  models ,  how-to
0 186 January 29, 2021
Conda Install BMTK
Technical
models ,  bug-report ,  how-to ,  software
3 176 January 29, 2021
Comparing expression of two genes
Science
atlas-human-brain-adult ,  anatomy ,  experiment-design ,  analysis ,  how-to
8 356 January 27, 2021
Donor age information for cortical area smart seq (adult?)
Science
atlas-cell-types ,  atlas-human-brain-adult ,  celltype ,  experiment-design ,  how-to
3 162 January 20, 2021
Nuclei isolation for single-nuclei rna sequencing
Technical
how-to ,  rna-seq ,  tissue-process
2 413 January 27, 2021
Access 3d data for blender based animations
Technical
atlas-reference-maps ,  anatomy ,  analysis ,  api ,  how-to
0 154 January 18, 2021
Choosing a specific atlas ontology and download data
Technical
atlas-mouse-brain-adult ,  how-to
8 212 January 21, 2021
What is the meaning of atlas_id and st_level in 1.json?
Technical
atlas-mouse-brain-adult ,  anatomy ,  experiment-design ,  how-to
3 213 January 19, 2021
M1 10X Reference FastQ files
Science
experiment-design ,  how-to ,  rna-seq ,  atac-seq
1 146 January 8, 2021
Common Cell Type Nomenclature (CCN) publication now available in eLife
Cell Taxonomies
celltype ,  analysis ,  how-to ,  publication
0 180 January 8, 2021
How to acquire the structure label for the expression grid data?
Technical
transcriptomics ,  api ,  how-to ,  annotation
12 782 January 5, 2021
NWB Schema Version For Multimodal Characterization in Mouse Visual Cortex
Technical
nwb ,  allensdk ,  how-to ,  software
2 114 December 21, 2020
How can I access the brain surface that is used in adult human brain atlas?
Science
atlas-reference-maps ,  atlas-human-brain-adult ,  reference-coordinates ,  anatomy ,  how-to
1 210 December 21, 2020
Mean waveforms for mouse intracellular waveforms
Technical
atlas-cell-types ,  electrophysiology ,  allensdk ,  how-to
2 162 December 14, 2020
Open for (neuro)science tutorials: Introduction to the Allen Brain Map
Show & Tell
education ,  training ,  how-to
0 195 December 10, 2020
Slow download on NWB files from brain observatory Neuropixels data
Technical
brain-observatory-visual-coding ,  allensdk ,  bug-report ,  how-to
3 206 December 8, 2020