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Community Guidelines

This is a Civilized Place for Public Discussion Please treat this discussion forum with the same respect you would a public park. We, too, are a shared community resource — a place to share skills, knowledge and inter…

2 March 15, 2019
Welcome to the Allen Brain Map Community Forum! 4 June 14, 2018
Running the allensdk analyses on new data 1 October 21, 2019
CCF rego 2020 competition 1 October 18, 2019
Identifying whether a branch is dendrite or axon in .swc files 2 October 17, 2019
Access connectivity streamline data 24 October 16, 2019
Loading data from transcrip.tome file in Python with h5py 3 October 16, 2019
How do I find the injection hemisphere for a mouse connectivity dataset? 1 October 10, 2019
Anatomic Structures ISH Survey 3 October 8, 2019
Downloading H&E Images from Ivy Gap through API 1 October 5, 2019
Obtaining Image id in Ivy Glioblastoma Atlas Project 3 October 5, 2019
How to download images from the Ivy Glioblastoma Atlas Project 3 October 4, 2019
H&E Images for Normal Brain Tissues 1 October 4, 2019
Map gene expression data on SVG images 1 October 4, 2019
Reproducing "differential gene search" via API for mouse brain ISH data 3 October 3, 2019
Transcriptomics-based classification and nomenclature of neocortical cell types 1 October 2, 2019
Is the previous version of the site still available somewhere? 2 October 2, 2019
How do I find genes that differentiate Cell Types? (differential search) 1 September 17, 2019
How do I find marker genes for a Cell Type or Cell Set? 1 September 17, 2019
AllenSDK 0.14.5 released 1 July 10, 2018
Can I map my own data to these data sets? 1 September 17, 2019
What datasets are available in the Transcriptomics Viewer? 1 September 3, 2019
Error in query... Connection reset by peer 4 September 26, 2019
Neurons/Glia nuclei sizes for single nuclear RNAseq 5 September 23, 2019
Allen Brain Explorer functionality: Loading 3D Brain Reference Map Models into MatLab/Python/R 3 September 23, 2019
Missing region IDs 4 September 18, 2019
Is Allen Brain Observatory in vivo calcium image data integrated with other 3D brain mapped datasets? 1 July 3, 2019
Getting Started with the Transcriptomics Explorer 2 September 17, 2019
Does the neuronal noise in cortex help generalization? 1 September 13, 2019
Comparing cross-organ gene expression levels: How much, and where are genes expressed? 3 September 11, 2019