Is the absolute soma depth (in um) available for the neurons in the Cell Types database?

Technical
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1

Hi, I would like to have the absolute distance of the soma from pia for some of the neurons in the cell types database. Is this available? I’ve so far only found nomalised soma depth. From the Kalmbach et al Neuron 2018 paper however it seems that distance from pia was recorded for human supragranular neurons. Thanks

2

Hello @Thijs, absolute distance from pia can be available for only those cells with morphologies, is that still of interest to you?

-Rachel

3

Hi @racheld, thanks for your reply. Yes this would be tremendously valuable. I’m interested in the human L2/3 spiny neurons, would you have this available? Or have I missed this in the cell types database?

4

Hello @racheld, this is a kind reminder that I am still very eager to get the absolute distance from pia measures of the human L2/3 spiny cells with morphologies. Any chance I can get these?
Kind regards
Thijs

5

@Thijs Thanks for the reminder, message me your email and I can send you the csv.

6

Hi @racheld, my email is matthijs.verhoog@uct.ac.za. Thank you!