api

Topic Replies Views Activity
CCF v3 Anatomy: finding structure annotation ids
Technical
atlas-reference-maps ,  atlas-mouse-brain-adult ,  anatomy ,  api ,  how-to ,  annotation
7 84 November 20, 2020
How to acquire the structure label for the expression grid data?
Technical
transcriptomics ,  api ,  how-to ,  annotation
10 419 November 10, 2020
Quantification of gene expression by in situ hybridization: finding and using the raw values
analysis ,  api ,  how-to ,  in-situ-hybridization ,  annotation ,  developing
26 1125 November 10, 2020
Download/generate top-down cortical fluorescence image data
Technical
atlas-mouse-brain-connectivity ,  allensdk ,  api ,  how-to
4 80 October 23, 2020
Soma size in Cell Types SDK
Technical
atlas-cell-types ,  celltype ,  allensdk ,  api
4 85 September 29, 2020
Matching experiment section images with brain segmentation
Technical
atlas-reference-maps ,  atlas-mouse-brain-connectivity ,  analysis ,  api ,  how-to
8 145 September 15, 2020
Mouse reference atlas: NRRD file header problem, and question on axes
Technical
atlas-reference-maps ,  atlas-mouse-brain-connectivity ,  analysis ,  api
1 110 September 14, 2020
Downloading Gene Grid Data Expression at a higher resolution
Technical
atlas-reference-maps ,  allensdk ,  api
2 175 August 24, 2020
Mapping to a coronal P14 mouse brain atlas/space
Technical
atlas-reference-maps ,  atlas-mouse-brain-adult ,  api ,  how-to
2 198 August 10, 2020
Interpreting df/f trace data and finding stimulus onset
Technical
brain-observatory-visual-coding ,  analysis ,  allensdk ,  api ,  how-to
9 284 August 3, 2020
Image-to-reference for whole section or section dataset?
Technical
reference-coordinates ,  api ,  how-to
1 139 August 3, 2020
Human Reference Atlas Right Hemisphere
Technical
atlas-reference-maps ,  atlas-human-brain-adult ,  allensdk ,  api ,  software ,  human
1 127 July 24, 2020
Extracting data for all genes from an ROI
Technical
atlas-mouse-brain-adult ,  anatomy ,  transcriptomics ,  api ,  how-to
8 286 June 2, 2020
HELP! Jupyter Example Code Abbreviations - Brain Observatory
Technical
brain-observatory-visual-coding ,  api ,  how-to ,  software
1 147 April 20, 2020
Resources to build from the developing mouse brain reference atlas
Technical
atlas-mouse-brain-developing ,  api ,  how-to
3 432 February 16, 2020
Downloading ISH or Expression data
Technical
image-registration ,  transcriptomics ,  analysis ,  api ,  how-to
6 440 December 17, 2019
Is mouse age available for cell type ephys and morpohology data?
Technical
celltype ,  analysis ,  api
1 177 December 16, 2019
Coordinates to brain structure api
Technical
reference-coordinates ,  anatomy ,  api
2 287 October 28, 2019
How do I download a list of all genes with ISH data?
Technical
api ,  how-to ,  in-situ-hybridization
0 199 October 24, 2019
Would it be possible to add https access to the api.brain-map.org?
Technical
request ,  api
2 344 October 22, 2019
Downloading H&E Images from Ivy Gap through API
Technical
atlas-human-brain-glioblastoma ,  api ,  how-to ,  histology
0 679 October 5, 2019
Obtaining Image id in Ivy Glioblastoma Atlas Project
Technical
atlas-human-brain-glioblastoma ,  api ,  how-to
2 193 October 5, 2019
How to download images from the Ivy Glioblastoma Atlas Project
Technical
atlas-human-brain-glioblastoma ,  api ,  how-to
2 711 October 4, 2019
Error in query... Connection reset by peer
Technical
python ,  api
3 461 September 26, 2019
View my own volumetric data in BrainExplorer
Technical
atlas-reference-maps ,  reference-coordinates ,  brain-explorer ,  api ,  how-to
1 319 August 22, 2019
Is dipde unmaintained?
Site Feedback
models ,  api ,  software
2 313 August 14, 2019
Attempting to Download Substructures for Coronal P56 Mouse Atlas
Technical
atlas-reference-maps ,  reference-coordinates ,  anatomy ,  api ,  how-to
2 613 May 14, 2019
Difficulty downloading tuning curve data through API
Technical
brain-observatory-visual-coding ,  api ,  how-to
1 340 May 6, 2019