Hi there,
I’m working with the Allen Human Brain ISH database, and I’m trying to retrieve large amounts of image data for a neuroanatomy project involving cell morphologies.
I know from my previous work with the mouse brain ISH that there is a jupyter notebook linked here that works to retrieve and organize images along with their metadata.
I have not been able to do this with the human ISH database. Every time I supply human experiment IDs, the code throws several errors, and cannot connect or find the datasets in question.
Is there a way to programmatically access human ISH data without downloading single images manually from the database?
Please let me know.
Thanks!