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Generating Expression Masks De Novo
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1
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52
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August 21, 2025
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Downloading gene expression data for the different mouse brain regions (expressed/not expressed) as a list
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2
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48
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August 18, 2025
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Registering partial 2D IHC images to Allen Brain Atlas using QuickNII
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2
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24
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August 16, 2025
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Trouble Download xml file from ISH Differential search results
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4
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25
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August 15, 2025
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Differential search (Human Brain)
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4
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599
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August 13, 2025
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Hello everyone, I am trying to map my entire mouse brain MERFISH sections of P4 & P7 to the Allen Brain Atlas and annotate the brain regions. Could anyone clarify the exact input data required for this process?
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8
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251
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August 13, 2025
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Estimate location of brain sagittal or coronal slice
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1
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104
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August 12, 2025
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Batch download: Developing mouse brain
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8
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77
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August 11, 2025
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Extracting data for all genes from an ROI
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10
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1918
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August 4, 2025
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Metadata/Publication for SMART-Seq v4 DFC M1C Dataset
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1
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30
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July 29, 2025
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Anyone familiar with studies on consciousness in computational neuroscience?
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1
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63
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May 27, 2025
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Accessing putative cell type in neuropixel dataset
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9
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1271
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April 24, 2025
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Mouse brain reference atlases & mapping your own data
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7
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12939
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March 26, 2025
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Is there a cell type taxonomy of mouse in the hippocampus?
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4
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58
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March 20, 2025
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Downloading full resolution images using AllenSDK
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5
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197
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February 24, 2025
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Neocortex and SATB2 expression
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1
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45
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February 14, 2025
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Artificial Brain generation copycat from a normnal brain possible?
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2
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54
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February 7, 2025
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Identifying the cell type based on cluster_name
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1
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90
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January 13, 2025
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How to plot an annotation slice map with solid boundaries and transparent filling for the interior?
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2
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89
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January 10, 2025
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How to download images from the Ivy Glioblastoma Atlas Project
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3
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2496
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January 7, 2025
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New abc_atlas_acces release with Aging Mouse Data
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0
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88
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December 18, 2024
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Processed gene expression matrix for SEA-AD?
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1
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48
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December 10, 2024
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How to use microarray data
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3
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72
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December 10, 2024
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How can I optimize my snRNA-seq workflow—both experimentally and bioinformatically—to enable high-resolution transcriptomic cell type mapping?
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2
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128
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December 4, 2024
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Whole Human Brain (WHB) 10x RNA-seq Data Celltype Annotations
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1
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56
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November 25, 2024
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Download image stacks
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1
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72
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November 22, 2024
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MapMyCells Troubleshooting Guide
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1
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610
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November 18, 2024
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Using the brain map for teaching
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1
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73
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November 7, 2024
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How to use "Mouse Whole Cortex and Hippocampus 10x" to annotate a spatial data set in seuart?
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2
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1176
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June 1, 2023
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Gene expression matrix.cvs is too large to load it
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22
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6262
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October 8, 2024
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