@lydian thank you. One more follow up question. I think your response was pertaining to the nifti data? I was actually talking about the ITK Snap data with the surfaces already segmented out and export. During the export step 5) here (Human Brain Atlas Mesh Files - #2 by nileg) each region is exported as a different file which can be loaded up into blender. When this happens the shapes lose their names. I can manually look at itksnap and the blender file and determine the region, I was just checking if this list already existed. Thanks,
Related topics
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| Reproducing Allen CCFv3 (eg downloading mouse brain volumes) | 4 | 2010 | August 8, 2019 | |
| Choosing a specific atlas ontology and download data | 8 | 656 | January 21, 2021 | |
| CCF v3 Anatomy: finding structure annotation ids | 7 | 2530 | November 20, 2020 | |
| Allen Brain Explorer functionality: Loading 3D Brain Reference Map Models into MatLab/Python/R | 2 | 2697 | September 23, 2019 | |
| Downloading H&E Images from Ivy Gap through API | 0 | 1351 | October 5, 2019 |