-
Tracking the same neurons across multiple days in Ca2+ imaging data. Sheintuch et al. https://www.sciencedirect.com/science/article/pii/S2211124717314304
-
SCALPEL: Extracting neurons from calcium imaging data. Petersen et al. https://arxiv.org/abs/1703.06946
-
Untuned but not irrelevant: the role of untuned neurons in sensory information coding. Zylberberg. https://www.biorxiv.org/content/early/2017/09/21/134379
-
Running reduces firing but improves coding in rodent higher-order visual cortex. Christensen & Pillow. https://www.biorxiv.org/content/early/2017/11/04/214007
-
Identification and targeting of cortical ensembles. Carrillo-Reid et al. https://www.biorxiv.org/content/early/2017/11/29/226514
-
Organization of neural population code in mouse visual system. Esfahany et al. http://www.eneuro.org/content/5/4/ENEURO.0414-17.2018
-
Population coupling predicts the plasticity of stimulus responses in cortical circuits. Sweeney & Clopath. https://www.biorxiv.org/content/early/2018/02/14/265041
-
Neuronal activities in the mouse visual cortex predict patterns of sensory stimuli. Cai et al. https://link.springer.com/article/10.1007%2Fs12021-018-9357-1
-
High-accuracy decoding of complex visual scenes from neuronal calcium responses. Ellis & Michaelides. https://www.biorxiv.org/content/early/2018/03/26/271296
-
Weighted network density predicts range of latent variable model accuracy. Palmerston et al. https://www.biorxiv.org/content/early/2018/06/11/343285.full.pdf+html
-
Fast and robust active neuron segmentation in two-photon calcium imaging using spatiotemporal deep learning. Soltanian-Zadeh et al. https://www.pnas.org/content/early/2019/04/10/1812995116
2 Likes
Inferring cortical function in the mouse visual system through large-scale systems neuroscience.
…and an overview of the purpose of these projects:
Neuroscience: Observatories of the mind, by Christof Koch & R. Clay Reid (2012)
https://www.nature.com/articles/483397a
Exploring cortex in a high-throughput manner by building brain observatories.
https://bmcneurosci.biomedcentral.com/articles/10.1186/1471-2202-15-S1-A2
- A comprehensive data-driven model of cat primary visual cortex. Antolik et al.
https://www.biorxiv.org/content/early/2018/09/24/416156
Nice use of Allen Brain Observatory data: Exact spike train inference via ℓ0 optimization, by Sean Jewell & Daniella Witten. Ann. Appl. Stat. v12,#4 (2018), 2457-2482.
https://projecteuclid.org/euclid.aoas/1542078052