Documentation on Addtional Reference Data

Science
1

Hi,

I’m looking for documentation on the Additional Reference Data for the Developing Mouse Brain. Specifically, I am trying to find the slice thickness and interval for the E16.5 coronal brain.

Thanks!

2

Hi karton,
Section thickness is 20 micron for the earlier timepoints up to P4 and 25 micron for P14 and older (section thickness is an attribute of the SectionDataSet object)

The interval varies by developmental stage and can be found here: Developing Mouse Reference Atlas - How To / Allen Developing Mouse Brain Atlas - Allen Brain Map Community Forum

Thanks for your interest in the Atlas,
J