MICrONs - cannot access GitHub Repo for Schneider-Mizell et al. 2025

Technical
1

Hello,

When I was accessing the analysis gallery page in the microns tutorial, the repository for code files from Schneider-Mizell et al. 2025 is not populating. I get an “error 404 page does not exist” warning. The other github repositories for the other publications in the Nature collection ( Microns Consortium, Ding, Wang, Elabbady, Gamlin, Cellii, and Dorkenwald) are populating when I click on those pages.

Thanks,

MP

2

Hello,

I’m just following up to see if the GitHub repo can be made accessible for the Schneider-Mizell et al. 2025 paper. It is still unavailable. I have tried accessing it from the Nature paper under “Code Availability” and I am still getting error 404. I have attached a link to the repo directly, here.

Not sure if you’re the right person for this @tylermo but would you happen to know who to connect to ensure access to the Github repo?

Thanks,

MP

3

Thank you for the query! The repo was inadvertently set to private and has been updated to be public. It should be available now!

1 Like
4

Wonderful, thank you so much @ceesem ! I do have another question though.

I’m working on a macbook pro M3Pro Apple silicon chip. I tried opening and running the jupyter notebooks for some of the MICrONS papers (Elabbady et al., 2025; Schneider-Mizell et al., 2025), and I run into dependency issues, that my versions of numpy or pandas are too new. I think there’s an issue where certain older versions of python cannot be installed on Macs with apple silicon because their hardware is too new. I wasn’t sure if there’s a workaround for that. If you have any insights I would really appreciate that.

Thanks!

MP