I was using the trimmed_means.csv file and the analysis was going great but it seems for the data I am looking for, I need to access the matrix.csv file. I downloaded it and it worked but it the first column is labelled with sample names so it was a bit confusing how to work with it.
I am trying to access L6b data and specifically wanting to access Ctgf+ cells and compare them to all the other cells in L6b. Having filtered by L6b, and Ctgf, I would like to evaluate the values of Hcrt, Hcrtr1 and Hcrtr2 in these selections.
Ultimately, I would like to access the other genes as well but these are my foci right now.