Anatomical Divisions defined on Brain atlas

1

Does anyone know how to find the code to the anatomical divisions that define what each acronym means? I found the reference paper for the atlas, but it only lists a fraction of the brain regions acronyms. Is there a page I can look for to find this information? Thanks!

Regions listed in reference
" olfactory areas (OLF), isocortex (CTX), hippocampal formation (HPF), cortical subplate (CTXsp), striatum (STR), pallidum (PAL), thalamus (TH), hypothalamus (HY), midbrain (MB), hindbrain (HB), and cerebellum (CB)."

2

Any acronym included in and Allen Reference Atlas can be accessed by visiting the relevant atlas from this landing page and then typing it in the search box. Here is an example for mouse OLF. We have also compiled acronym tables for the whole mouse brain and whole human brain data sets in the Allen Brain Cell Atlas here (mouse; human).

2 Likes
3

(post deleted by author)