Image-to-reference for whole section or section dataset?

Technical
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1

Hi,

I was wondering if it is possible to download a mapping for all coordinates in an section image to the CCF? I understand the Image synchronization API endpoints have this capability, I am just curious if there would be a way to do this without querying that API for a large number of coordinates.

Thanks!

2

Hello, You are correct that there is no simple tool to just download a list of the mappings for all coordinates. As you mention, the API can do this, but I suppose it would require many individual queries.

You’ve probably seen it already, but including for reference: https://help.brain-map.org/display/api/Image-to-Image+Synchronization#Image-to-ImageSynchronization-Image-To-Reference

Best regards,
Wayne