Topic Replies Views Activity
Brain Explorer 2 crashes frequently on Mac/Catalina
Site Feedback
atlas-reference-maps ,  atlas-human-brain-adult ,  bug-report
5 223 March 14, 2021
Brain Explorer on Mac Catalina
Technical
brain-explorer ,  bug-report ,  software
5 409 March 14, 2021
CCFv3 Highlights: Transgene Expression Data
Show & Tell
atlas-reference-maps ,  reference-coordinates ,  anatomy ,  how-to
0 92 March 9, 2021
Open for (neuro)science symposium: Day 1, Allen Cell Types Database
Show & Tell
transcriptomics ,  celltype ,  workshop
0 94 March 12, 2021
Open for (neuro)science symposium: Day 3, Common Coordinate Framework and MICrONS Explorer
Show & Tell
anatomy ,  workshop ,  imaging
0 62 March 12, 2021
Open for (neuro)science symposium: Day 2, Allen Brain Observatory
Show & Tell
brain-observatory-visual-coding ,  electrophysiology ,  2p-imaging
0 62 March 12, 2021
Open for (neuro)science tutorial: Common Coordinate Framework
Show & Tell
training ,  anatomy ,  workshop ,  mouse
0 68 March 11, 2021
Open for (neuro)science tutorial: MICrONS Explorer
Show & Tell
training ,  workshop
0 41 March 11, 2021
Open for (neuro)science tutorial: Allen Cell Types Database transcriptomics
Show & Tell
training ,  transcriptomics ,  workshop
0 40 March 11, 2021
Open for (neuro)science tutorial: Allen Brain Observatory
Show & Tell
brain-observatory-visual-coding ,  training ,  electrophysiology ,  2p-imaging ,  workshop
0 49 March 11, 2021
IPFX 1.0.3 Release - Notice for involved
Technical
electrophysiology ,  celltype ,  allensdk
0 30 March 9, 2021
Doubts about mouse RNA-Seq single cell data
Science
experiment-design ,  analysis ,  how-to ,  rna-seq ,  mouse ,  transcriptomics_explorer
4 187 March 8, 2021
2D histological image registration, human prefrontal brain
Technical
atlas-human-brain-adult
2 98 March 8, 2021
Download Section Dataset Images from Brainspan ISH with gene/probe and donor age metadata
Technical
allensdk ,  api ,  human
1 87 March 8, 2021
Fastq and Bam file mapping to sample IDs in Berg Patchseq transcriptomic dataset
Technical
transcriptomics ,  analysis ,  how-to ,  rna-seq
1 85 March 5, 2021
Open for (neuro)science tutorials: New from the Allen Cell Types Database
Show & Tell
atlas-cell-types ,  training ,  cell-morphology ,  electrophysiology ,  transcriptomics
3 107 March 4, 2021
Allen Human Reference Atlas - 3D, 2020 (new!)
atlas-reference-maps ,  reference-coordinates ,  anatomy ,  human
6 1594 March 4, 2021
MIES software abilities
Technical
electrophysiology
9 110 February 26, 2021
[Brainspan ISH] Atlas Image to Section Image
Technical
reference-coordinates ,  anatomy ,  allensdk ,  api ,  how-to ,  human
1 68 February 26, 2021
Download the outlines of brain areas
Technical
atlas-reference-maps ,  anatomy ,  analysis ,  how-to ,  annotation
1 59 February 26, 2021
Do the MRI images match spatially with the resected tumor which cut into tissue blocks in Ivy GAP glioblastoma database?
Science
atlas-human-brain-adult
2 64 February 26, 2021
How to determine the flow Direction of Mouse Connectivity Data
Technical
atlas-mouse-brain-connectivity ,  experiment-design ,  analysis ,  how-to
2 70 February 26, 2021
How to switch between the 3 coordinate systems of Mouse Connectivity?
Technical
atlas-mouse-brain-connectivity ,  reference-coordinates ,  brain-explorer ,  connectivity ,  allensdk
3 88 February 25, 2021
Differential search (Human Brain)
Technical
atlas-human-brain-adult ,  analysis ,  how-to
2 59 February 25, 2021
How are the edges of the mouse connectivity data drawn in the Brain Explorer?
Technical
atlas-mouse-brain-connectivity ,  brain-explorer ,  connectivity ,  allensdk
1 59 February 24, 2021
Reproducing r-score correlations in Allen Human Brain Atlas
Science
atlas-human-brain-adult ,  training ,  transcriptomics ,  analysis ,  how-to
9 129 February 22, 2021
Quantification of gene expression by in situ hybridization: finding and using the raw values
Science
analysis ,  api ,  how-to ,  in-situ-hybridization ,  annotation ,  developing
29 1479 February 18, 2021
Allen Mouse CCF - accessing and using related data and tools
Technical
atlas-reference-maps ,  reference-coordinates ,  how-to
0 2540 November 21, 2019
Finding Region Areas of ABA Plates
Technical
atlas-reference-maps ,  anatomy ,  analysis ,  how-to
2 71 February 11, 2021
Neuropixel - empty field in units
Technical
brain-observatory-visual-coding ,  electrophysiology ,  allensdk ,  api ,  how-to
2 61 February 8, 2021