Topics tagged rna-seq

Topic	Replies	Views	Activity
Top Leaf classification possible for Mouse Whole Cortex and Hippocampus (SMART-seq) RNAseq data? Cell Taxonomies atlas-cell-types , rna-seq , mouse	1	431	October 4, 2022
Mouse Whole Cortex and Hippocampus 10x Technical atlas-mouse-brain-adult , transcriptomics , rna-seq	3	535	August 8, 2022
Is smart-seq matrix human multiple cortical areas normalized? Science atlas-cell-types , rna-seq , human	1	474	July 18, 2022
How do you Interpret Gene Expression Values (counts)? Science transcriptomics , rna-seq	2	922	June 10, 2022
snRNA-seq M1 Data Across Species rna-seq	2	467	April 20, 2022
MRI coordinates of IVY GAP RNAseq data Technical rna-seq	3	800	March 2, 2022
Nuclei isolation for single-nuclei rna sequencing for larger tissues Technical how-to , rna-seq	1	685	January 20, 2022
RNAseq data of the Brain Span Atlas of the Human Brain - confirmation of the method Science transcriptomics , experiment-design , rna-seq , human	1	992	January 6, 2022
Does the BrainSpan RNA-Seq data cover only protein-coding genes? atlas-human-brain-developing , transcriptomics , rna-seq	1	731	November 15, 2021
Is there a reference brain sample for the RNA-Seq data in the Human Developmental Transcriptome tool from the Allen Brain Atlas? transcriptomics , rna-seq	4	814	November 10, 2021
Marker genes of Transcriptomic explorer Technical transcriptomics , celltype , how-to , rna-seq , software	1	700	November 9, 2021
References and citations of human RNA-seq datasets Technical celltype , rna-seq , human	1	613	November 5, 2021
Human Multiple Cortical Areas SMART-seq (2019) Science atlas-cell-types , transcriptomics , analysis , how-to , rna-seq	1	678	July 7, 2021
Assigning Allen Transcriptomic Taxonomy to External Dataset Technical atlas-reference-maps , transcriptomics , celltype , analysis , rna-seq	3	692	June 17, 2021
V1 & ALM - SMART-SEQ (2018) download links broken Site Feedback bug-report , rna-seq	1	524	June 17, 2021
Freezing of isolated nuclei Science how-to , rna-seq , tissue-process	1	2153	May 24, 2021
Doubts about mouse RNA-Seq single cell data Science experiment-design , analysis , how-to , rna-seq , mouse , transcriptomics_explorer	4	936	March 8, 2021
Fastq and Bam file mapping to sample IDs in Berg Patchseq transcriptomic dataset Technical transcriptomics , analysis , how-to , rna-seq	1	551	March 5, 2021
Nuclei isolation for single-nuclei rna sequencing Technical how-to , rna-seq , tissue-process	2	1659	January 27, 2021
New Genome Browser views for single cell/nucleus transcriptomics! Transcriptomics Explorer celltype , rna-seq	0	536	January 13, 2021
M1 10X Reference FastQ files Science experiment-design , how-to , rna-seq , atac-seq	1	534	January 8, 2021
M1 10X Reference does not map to GRCh38.p2 Science atlas-reference-maps , atlas-human-brain-adult , analysis , bug-report , rna-seq	4	632	December 18, 2020
How do I access raw RNA-Seq data (e.g., FASTQ, bam)? Technical request , transcriptomics , analysis , rna-seq	4	3672	December 18, 2020
PKM Splice Variants Transcriptomics Explorer transcriptomics , rna-seq	1	846	November 26, 2020
DRG (dorsal root ganglion) sc/sn RNAseq profiling from NHP and humans Science atlas-cell-types , transcriptomics , rna-seq , human	2	848	August 12, 2020
Reading RNA-seq data into python Technical atlas-cell-types , allensdk , rna-seq	3	986	August 11, 2020
Allen Gene Expression Datasets Science atlas-mouse-brain-adult , atlas-human-brain-adult , rna-seq , human	2	942	July 7, 2020
Human and mouse RNA-seq data from cortex and hippocampus Science transcriptomics , analysis , how-to , rna-seq , mouse , human	2	851	May 7, 2020
What is the Z score reference value in RNAseq GBM data? Science atlas-human-brain-glioblastoma , transcriptomics , analysis , rna-seq , cancer	3	3277	April 15, 2020
Extracting RNA-count data for specific genes from expression matrix Technical transcriptomics , how-to , rna-seq	1	1153	April 15, 2020