transcriptomics

Topic Replies Views Activity
Extracting data for all genes from an ROI
Technical
atlas-mouse-brain-adult ,  anatomy ,  transcriptomics ,  api ,  how-to
8 458 June 2, 2020
Code for clustering analysis of single nuclei RNA sequencing data?
Technical
atlas-cell-types ,  transcriptomics ,  analysis ,  how-to ,  human
2 210 May 19, 2020
Human and mouse RNA-seq data from cortex and hippocampus
Science
transcriptomics ,  analysis ,  how-to ,  rna-seq ,  mouse ,  human
2 375 May 7, 2020
How to plot mean rather than individual human expression data
Technical
atlas-human-brain-adult ,  transcriptomics ,  analysis ,  how-to ,  mri
2 186 April 23, 2020
What is the Z score reference value in RNAseq GBM data?
Science
atlas-human-brain-glioblastoma ,  transcriptomics ,  analysis ,  rna-seq ,  cancer
3 974 April 15, 2020
Extracting RNA-count data for specific genes from expression matrix
Technical
transcriptomics ,  how-to ,  rna-seq
1 285 April 15, 2020
Citation for Allen scRNAseq Mouse and Human datasets
Transcriptomics Explorer
transcriptomics ,  rna-seq ,  publication
4 328 March 30, 2020
Non-anonymized BAM files
Transcriptomics Explorer
transcriptomics ,  analysis ,  how-to ,  rna-seq ,  human ,  alzheimers
1 236 March 26, 2020
Comparing specific transcripts in excitatory vs. inhibitory cells
Science
transcriptomics ,  analysis ,  how-to
3 243 March 6, 2020
AHBA microarray batch
Science
atlas-human-brain-adult ,  transcriptomics ,  analysis ,  how-to
2 217 March 2, 2020
Human brain MTG single cell data mapped to mouse brain single cell RNAseq?
Science
reference-coordinates ,  transcriptomics ,  rna-seq ,  mouse ,  human
9 540 January 24, 2020
How do I get access to full ApoE genotype information in the Aging, Dementia, and TBI study
Science
transcriptomics ,  how-to ,  rna-seq ,  human
2 220 January 8, 2020
Downloading ISH or Expression data
Technical
image-registration ,  transcriptomics ,  analysis ,  api ,  how-to
6 580 December 17, 2019
Loading data from transcrip.tome file in Python with h5py
Technical
transcriptomics ,  python ,  analysis ,  software
2 798 October 16, 2019
Neurons/Glia nuclei sizes for single nuclear RNAseq
Cell Taxonomies
cell-morphology ,  transcriptomics ,  celltype ,  analysis ,  rna-seq ,  human
4 525 September 23, 2019
Comparing cross-organ gene expression levels: How much, and where are genes expressed?
Science
comparative-bio ,  transcriptomics ,  how-to ,  human ,  brain
2 326 September 11, 2019
Where can I download single nucleus RNA-seq data from human cortex?
Technical
atlas-cell-types ,  transcriptomics ,  celltype ,  how-to ,  rna-seq
2 704 August 22, 2019
Why are there so many oligodendrocytes in snRNAseq studies from post mortem human brains?
Science
atlas-cell-types ,  transcriptomics ,  celltype ,  analysis
1 343 August 22, 2019
Open questions from recent workshops on cell ontology and taxonomy
Cell Taxonomies
transcriptomics ,  celltype ,  workshop
5 763 August 20, 2019
Mouse brain scRNAseq: distribution of cells by cortical layers/brain subregions
Cell Taxonomies
transcriptomics ,  analysis
3 478 August 12, 2019
Preprints out for transcriptional and epigenomic profiling of mouse and human neurons
Science
rave ,  transcriptomics ,  celltype ,  rna-seq ,  publication
1 439 June 18, 2019
Availability of human genome sequence data
atlas-human-brain-developing ,  atlas-human-brain-aging-dementia-tbi ,  atlas-human-brain-glioblastoma ,  transcriptomics ,  human ,  genome
1 468 May 24, 2019
Is it possible to request the addition of new genes to the mouse or human brain atlases?
Site Feedback
atlas-mouse-brain-adult ,  transcriptomics ,  how-to ,  in-situ-hybridization
0 349 April 1, 2019