How To
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Connectivity Atlas: How to
This is the online help for the Allen Mouse Connectivity web application. The Allen Mouse Brain Connectivity Atlas is a high-resolution map of neural connections in the mouse brain. Built on an array of transgenic mice … |
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1 | 2545 | February 22, 2024 |
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Documentation: Cell Types Database
Document Description Overview Overview of methods for the Cell Types database Transcriptomics Overview Description of methods for single cell RNA isolation and sequence analysis Electrophysiology Overview Des… |
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1 | 2292 | February 22, 2024 |
| How to find the documentation for Allen Brain Observatory: Visual Coding 2P Dataset |
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4 | 393 | February 2, 2024 |
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Documentation: Brain Observatory
Document Description Visual Coding Overview Experimental design and methods used to perform a survey of physiological activity Stimulus Set and Response Analysis Detailed descriptions of sensory stimuli and dat… |
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1 | 1306 | February 22, 2024 |
| Allen Brain Explorer (Beta) User Guide |
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0 | 1127 | February 1, 2024 |
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Allen Brain Explorer: Documentation
CCFv3 Technical White Paper (4.4 MB) |
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1 | 460 | February 22, 2024 |
| Allen Brain Explorer: How to |
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0 | 430 | February 1, 2024 |
| Cell Types Database: Transcriptomics |
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0 | 430 | January 27, 2024 |
| How can I view the Allen Human Brain Atlas Documentation? |
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1 | 228 | January 29, 2024 |
| In Situ Hybridization (ISH) Data |
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1 | 2395 | January 29, 2024 |
| Projection Dataset |
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1 | 1774 | January 26, 2024 |
| Bregma-Lambda Distance in High Resolution Allen Brain Atlas: Mouse Brain |
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0 | 936 | January 26, 2024 |
| MapMyCells gives an error after Input File Validation |
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7 | 383 | January 23, 2024 |
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Documentation: Mouse Connectivity Atlas
Document Description Overview Technical whitepaper describing the Projection Mapping studies Retinal Projectome Technical whitepaper describing the Retinal Projectome Mapping studies Informatics Data Processi… |
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1 | 1692 | February 22, 2024 |
| MapMyCells has been updated with new data, algorithms, and features! |
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2 | 724 | January 19, 2024 |
| Data privacy. Should all data used in mapmycells be data ok to share publicly? |
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1 | 348 | January 19, 2024 |
| Full name for cell taxa |
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0 | 362 | January 18, 2024 |
| # cells per cluster |
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2 | 271 | January 16, 2024 |
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MapMyCells User Guide
Documentation resources Reviewing these resources helps you use MapMyCells to its full potential: MapMyCells intro page MapMyCells tutorial notebook Input file requirements, limits, and creation Available cell type ref… |
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8 | 1713 | March 21, 2024 |
| Analyze striatal 10x data by Seurat in R |
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1 | 560 | January 16, 2024 |
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Developing Mouse Reference Atlas
Reference Datasets Translation Between the Adult and Developing Mouse Ontologies Reference Atlas Viewing with Gene Expression Data Structure Ontology Ontology Levels Reference Atlas Viewing Tools Reference Datase… |
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1 | 846 | February 22, 2024 |
| Allen Developing Mouse Brain Atlas: Brain Explorer® 3-D viewer |
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0 | 682 | January 5, 2024 |
| Mapping algorithm failed because of application error |
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3 | 412 | November 30, 2023 |
| Mouse slice dataset |
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1 | 895 | January 9, 2024 |
| Service Pipelines |
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0 | 323 | January 9, 2024 |
| RMA Path Syntax |
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0 | 321 | January 9, 2024 |
| Allen Brain Atlas API: RMA Grammar |
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0 | 352 | January 9, 2024 |
| API Response Formats |
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0 | 337 | January 9, 2024 |
| Quantified Data by Structures |
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0 | 483 | January 9, 2024 |
| Downloading a WellKnownFile |
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0 | 328 | January 9, 2024 |