How To
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| How to map parcellation indices to anatomical ontology IDs in CCFv3 between the Allen Cell Atlas and Gene Expression Atlases? |
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0 | 201 | July 15, 2024 |
| Mapping failed MapMyCells |
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7 | 233 | July 12, 2024 |
| Deep Generative Mapping failed |
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1 | 90 | July 9, 2024 |
| How MERFISH obtained x,y,z coordinates of each cell |
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0 | 133 | July 9, 2024 |
| Itksnap view of annotation files |
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0 | 196 | June 26, 2024 |
| ABC Atlas Update Notes - May 14, 2024 |
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1 | 501 | June 26, 2024 |
| Command line upload |
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2 | 239 | June 22, 2024 |
| MapMyCells has been Updated with a Whole Human Brain Taxonomy |
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0 | 308 | June 17, 2024 |
| Error to uploading my H5ad file on Mapmycell |
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19 | 765 | May 29, 2024 |
| Mapping algorithm failed because of application errors - 'get_cmap' error |
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5 | 243 | May 21, 2024 |
| ‘merge requests’ into the Allen Mouse Brain Annotation Atlas |
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3 | 420 | May 8, 2024 |
| File Upload Error (Failed) in MapMyCells |
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4 | 262 | May 7, 2024 |
| Human Brain Atlas: Microarray Data Download |
|
3 | 1121 | April 16, 2024 |
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ABC Atlas User Guide
The ABC Atlas aims to empower researchers worldwide to explore and analyze multiple whole-brain datasets simultaneously. As the Allen Institute and its collaborators continue to add new modalities, species, and insights,… |
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0 | 4081 | March 21, 2024 |
| ABC Atlas: Example Use Cases (Whole Human Brain) |
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0 | 296 | April 1, 2024 |
| ABC Atlas Update Notes - March 26, 2024 |
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1 | 296 | March 31, 2024 |
| How to get all the raw slice data that was used for the Allen mouse brain Atlass |
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5 | 774 | March 27, 2024 |
| API for Mouse Brain Atlas |
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0 | 4084 | December 8, 2023 |
| ABC Atlas Update Notes - March 13, 2024 |
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0 | 361 | March 12, 2024 |
| H5 to h5ad conversion help |
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5 | 1078 | March 12, 2024 |
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How to: Allen Human Brain Atlas
This is the online help for the Allen Human Brain Atlas web application. The Dataset The Allen Human Brain Atlas is a unique multi-modal atlas of the human brain, integrating anatomic and genomic information and coupled… |
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1 | 3014 | March 6, 2024 |
| Accessing raw images from patch-seq morphological reconstructions |
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4 | 421 | March 4, 2024 |
| ABC Atlas Update Notes - February 27, 2024 |
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0 | 288 | February 26, 2024 |
| Access to raw (bam or fastq) Smart-seq2 human cortex scRNA-seq |
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2 | 384 | February 27, 2024 |
| What is a glif_sdk? |
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5 | 266 | February 26, 2024 |
| What does cell reporter status indicate? |
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2 | 309 | February 26, 2024 |
| Relative size of microarray samples compared to cortical ribbon |
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2 | 421 | February 23, 2024 |
| MapMyCells Update Notes - February 15, 2024 |
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2 | 439 | February 16, 2024 |
| API for Ivy Glioblastoma Atlas Project |
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0 | 581 | February 5, 2024 |
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Documentation for NHP Atlas
Document Description In Situ Hybridization Overview of methods for ISH studies Gene List Complete list of ISH genes and corresponding anatomical structure(s) with ISH data available Microarray Analysis Overvi… |
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0 | 532 | February 11, 2024 |